C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB GTPase activating protein 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028049 Rabgap1l-201 ENSMUSG00000026721 10090 - 1:160256572-160792938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028049
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028049 2.586±0.69 0.816±0.20 5.521±0.86 2.082±0.85 1.580±0.63 8.685±3.81 2.032±1.01 4.196±3.04 3.269±0.84 0.795±0.13 2.110±0.69 1.016±0.22 2.734±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 ISO Rab GTPase activator activity
GO:0005634 ISO nucleus
GO:0005769 ISO early endosome
GO:0005794 ISO Golgi apparatus
GO:0017137 IEA Rab GTPase binding
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0032880 ISO regulation of protein localization
GO:0035855 NAS megakaryocyte development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251507 RABGAP1L-001 protein_coding Homo_sapiens 0 3358
ENST00000325589 RABGAP1L-005 protein_coding Homo_sapiens 0 580
ENST00000347255 RABGAP1L-007 protein_coding Homo_sapiens 0 584
ENST00000357444 RABGAP1L-003 protein_coding Homo_sapiens 0 2041
ENST00000367686 RABGAP1L-009 processed_transcript Homo_sapiens 0 457
ENST00000367687 RABGAP1L-008 protein_coding Homo_sapiens 0 579
ENST00000367690 RABGAP1L-004 processed_transcript Homo_sapiens 0 806
ENST00000457696 RABGAP1L-002 protein_coding Homo_sapiens 0 1147
ENST00000469553 RABGAP1L-018 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000474375 RABGAP1L-013 processed_transcript Homo_sapiens 0 571
ENST00000478442 RABGAP1L-010 protein_coding Homo_sapiens 0 226
ENST00000486220 RABGAP1L-011 protein_coding Homo_sapiens 0 226
ENST00000487987 RABGAP1L-012 retained_intron Homo_sapiens 0 339
ENST00000489615 RABGAP1L-006 protein_coding Homo_sapiens 0 318
ENST00000526253 RABGAP1L-020 processed_transcript Homo_sapiens 0 424
ENST00000529145 RABGAP1L-021 processed_transcript Homo_sapiens 0 263
ENST00000529474 RABGAP1L-019 processed_transcript Homo_sapiens 0 422

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