C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin E synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028162 Ptges2-001 ENSMUSG00000026820 10090 + 2:32395896-32402739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028162 17.921±0.89 42.451±5.69 8.951±0.53 13.778±2.03 28.005±10.69 28.905±3.35 16.583±2.35 26.153±4.45 10.116±2.51 11.545±2.16 3.351±1.34 30.282±9.33 5.216±3.99 2.371±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001516 IEA prostaglandin biosynthetic process
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0009055 IEA electron carrier activity
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0016021 IEA integral component of membrane
GO:0016829 ISS lyase activity
GO:0020037 ISS heme binding
GO:0043295 ISS glutathione binding
GO:0045454 IEA cell redox homeostasis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046903 IDA secretion
GO:0050220 IEA prostaglandin-E synthase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277462 PTGES2-201 protein_coding Homo_sapiens 0 682
ENST00000338961 PTGES2-001 protein_coding Homo_sapiens 0 1088
ENST00000449878 PTGES2-007 protein_coding Homo_sapiens 0 617
ENST00000474124 PTGES2-010 processed_transcript Homo_sapiens 0 872
ENST00000476655 PTGES2-012 retained_intron Homo_sapiens 0 294
ENST00000476748 PTGES2-004 processed_transcript Homo_sapiens 0 669
ENST00000483625 PTGES2-009 processed_transcript Homo_sapiens 0 411
ENST00000485237 PTGES2-006 processed_transcript Homo_sapiens 0 250
ENST00000485510 PTGES2-008 retained_intron Homo_sapiens 0 392
ENST00000487063 PTGES2-005 processed_transcript Homo_sapiens 0 534
ENST00000493205 PTGES2-011 retained_intron Homo_sapiens 0 499
ENST00000496594 PTGES2-014 retained_intron Homo_sapiens 0 494
ENST00000497109 PTGES2-003 processed_transcript Homo_sapiens 0 250
ENST00000617202 PTGES2-202 protein_coding Homo_sapiens 0 712

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