C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dual oxidase maturation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028653 Duoxa1-201 ENSMUSG00000027224 10090 - 2:122303745-122306826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000028653
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000028653 2.578±1.65 0.354±0.15 2.652±0.00 0.116±0.00 6.231±1.63 0.292±0.18 0.080±0.03 0.028±0.00 2.246±1.52 0.138±0.07 0.421±0.26 0.053±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DP CIL_0004DP_0002 CGP 2:122279247-122302885
CIL_0004DF CIL_0004DF_0002 CGP 2:122298900-122313730
CIL_0004QK CIL_0004QK_0003 CGP 2:122302191-122347972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0042743 IGI hydrogen peroxide metabolic process
GO:0045666 IDA positive regulation of neuron differentiation
GO:0050727 IGI regulation of inflammatory response
GO:2000379 IGI positive regulation of reactive oxygen species metabolic process
GO:2000609 IGI regulation of thyroid hormone generation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267803 DUOXA1-001 protein_coding Homo_sapiens 0 1026
ENST00000430224 DUOXA1-006 protein_coding Homo_sapiens 0 224
ENST00000558326 DUOXA1-011 protein_coding Homo_sapiens 0 224
ENST00000558377 DUOXA1-009 protein_coding Homo_sapiens 0 243
ENST00000558422 DUOXA1-003 protein_coding Homo_sapiens 0 224
ENST00000558996 DUOXA1-004 protein_coding Homo_sapiens 0 224
ENST00000559013 DUOXA1-007 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000559014 DUOXA1-002 protein_coding Homo_sapiens 0 1026
ENST00000559226 DUOXA1-012 protein_coding Homo_sapiens 0 224
ENST00000559988 DUOXA1-014 protein_coding Homo_sapiens 0 379
ENST00000560572 DUOXA1-005 protein_coding Homo_sapiens 0 1037
ENST00000613425 DUOXA1-201 protein_coding Homo_sapiens 0 224

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