C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029116 Pcmtd2-001 ENSMUSG00000027589 10090 + 2:181837854-181857461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029116 2.381±0.37 3.923±0.60 12.944±2.99 12.473±6.83 3.072±1.33 2.046±0.82 6.376±0.59 7.030±0.52 6.055±2.68 4.317±0.43 14.128±1.30 4.726±4.08 2.465±1.74 3.014±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I7 CIL_0007I7_0002 CGP 2:181763332-181857461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004719 IEA protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006479 IEA protein methylation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075918 pcmtd2-001 protein_coding Danio_rerio 0 298
ENST00000299468 PCMTD2-201 protein_coding Homo_sapiens 0 863
ENST00000308824 PCMTD2-001 protein_coding Homo_sapiens 0 1075
ENST00000369758 PCMTD2-002 protein_coding Homo_sapiens 0 723
ENST00000608844 PCMTD2-004 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000609297 PCMTD2-007 processed_transcript Homo_sapiens 5e-24 115
ENST00000609372 PCMTD2-003 protein_coding Homo_sapiens 0 279
ENST00000609764 PCMTD2-009 protein_coding Homo_sapiens 0 481
ENST00000610074 PCMTD2-008 protein_coding Homo_sapiens 0 481
ENST00000610196 PCMTD2-010 protein_coding Homo_sapiens 0 348
ENST00000615818 PCMTD2-202 protein_coding Homo_sapiens 0 1062
ENST00000618274 PCMTD2-203 protein_coding Homo_sapiens 0 259

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