C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial fission regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029129 Mtfr1-004 ENSMUSG00000027601 10090 + 3:19188265-19219556 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000029129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000029129 1.712±0.00 6.663±2.45 2.019±0.16 2.926±1.22 3.307±1.33 5.957±1.12 3.064±0.24 7.228±1.03 10.611±1.46 2.661±0.55 5.494±1.01 2.934±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LS CIL_0005LS_0003 CGP 3:19132146-19220817
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262146 MTFR1-003 protein_coding Homo_sapiens 0 250
ENST00000424808 MTFR1-005 retained_intron Homo_sapiens 0 250
ENST00000517944 MTFR1-009 processed_transcript Homo_sapiens 2e-29 134
ENST00000518636 MTFR1-013 processed_transcript Homo_sapiens 0 327
ENST00000522239 MTFR1-010 processed_transcript Homo_sapiens 1e-34 150
ENST00000523170 MTFR1-008 processed_transcript Homo_sapiens 0 291
ENST00000523222 MTFR1-012 nonsense_mediated_decay Homo_sapiens 0 442

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