C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029542 Ints3-201 ENSMUSG00000027933 10090 - 3:90391380-90433636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029542 10.684±4.43 17.432±2.31 6.810±1.23 13.972±4.27 8.836±2.54 9.810±2.33 4.577±0.54 8.313±0.60 5.752±2.13 10.237±1.35 3.537±0.33 14.137±4.26 22.501±10.05 5.044±2.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007093 ISS mitotic cell cycle checkpoint
GO:0010212 ISS response to ionizing radiation
GO:0016180 ISS snRNA processing
GO:0032039 ISS integrator complex
GO:0070876 ISS SOSS complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067793 ints3-001 protein_coding Danio_rerio 0 1594
ENSDART00000124755 ints3-201 protein_coding Danio_rerio 0 623
ENST00000318967 INTS3-001 protein_coding Homo_sapiens 0 4405
ENST00000368669 INTS3-006 retained_intron Homo_sapiens 0 1011
ENST00000368670 INTS3-005 retained_intron Homo_sapiens 0 1430
ENST00000435409 INTS3-008 protein_coding Homo_sapiens 0 4379
ENST00000476843 INTS3-003 nonsense_mediated_decay Homo_sapiens 0 2340
ENST00000480659 INTS3-007 retained_intron Homo_sapiens 0 946
ENST00000481797 INTS3-002 retained_intron Homo_sapiens 0 3129
ENST00000491790 INTS3-004 retained_intron Homo_sapiens 0 283
ENST00000503133 INTS3-010 nonsense_mediated_decay Homo_sapiens 0 2340
ENST00000512605 INTS3-009 protein_coding Homo_sapiens 0 3099
ENST00000571768 INTS3-008 protein_coding Homo_sapiens 0 4379
ENST00000571829 INTS3-006 retained_intron Homo_sapiens 0 1011
ENST00000573844 INTS3-005 retained_intron Homo_sapiens 0 1430
ENST00000574879 INTS3-004 retained_intron Homo_sapiens 0 283
ENST00000575708 INTS3-010 nonsense_mediated_decay Homo_sapiens 0 2340
ENST00000575774 INTS3-003 nonsense_mediated_decay Homo_sapiens 0 2340
ENST00000575952 INTS3-002 retained_intron Homo_sapiens 0 3129
ENST00000576030 INTS3-001 protein_coding Homo_sapiens 0 4405
ENST00000576422 INTS3-009 protein_coding Homo_sapiens 0 3099
ENST00000576641 INTS3-007 retained_intron Homo_sapiens 0 946
ENST00000599578 AL513523.1-201 protein_coding Homo_sapiens 0 499
ENST00000623024 AL513523.2-201 protein_coding Homo_sapiens 0 499

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