C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrinogen alpha chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029630 Fga-201 ENSMUSG00000028001 10090 + 3:83026153-83033615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000029630
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000029630 0.079±0.00 0.185±0.00 0.029±0.00 0.508±0.25 0.039±0.00 1.039±0.23 212.203±131.38 0.184±0.08 0.011±0.00 0.195±0.15 19.208±18.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0002 VISTA 3:82670874-83271669

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005577 IEA fibrinogen complex
GO:0005938 IDA cell cortex
GO:0007165 IEA signal transduction
GO:0007596 IMP blood coagulation
GO:0030168 IEA platelet activation
GO:0030674 IEA protein binding, bridging
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302053 FGA-002 protein_coding Homo_sapiens 3.99931e-42 178
ENST00000403106 FGA-001 protein_coding Homo_sapiens 1.99965e-42 178

Loading