C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain containing kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029664 Tbck-201 ENSMUSG00000028030 10090 + 3:132684144-132796834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryTestisENSMUST00000029664
Transcript ID Adrenal Breast Colon Liver Ovary Testis
ENSMUST00000029664 3.435±1.36 1.842±0.30 0.360±0.00 0.433±0.00 1.994±0.76 0.194±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005575 ND cellular_component
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273980 TBCK-001 protein_coding Homo_sapiens 0 2844
ENST00000361687 TBCK-002 protein_coding Homo_sapiens 0 2270
ENST00000394706 TBCK-003 protein_coding Homo_sapiens 0 2074
ENST00000394708 TBCK-006 protein_coding Homo_sapiens 0 2863
ENST00000432496 TBCK-201 protein_coding Homo_sapiens 0 2844
ENST00000467183 TBCK-004 nonsense_mediated_decay Homo_sapiens 0 2270
ENST00000503516 TBCK-013 protein_coding Homo_sapiens 0 534
ENST00000503832 TBCK-011 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000505574 TBCK-010 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000506280 TBCK-005 processed_transcript Homo_sapiens 0 289
ENST00000506615 TBCK-017 processed_transcript Homo_sapiens 0 220
ENST00000507696 TBCK-009 protein_coding Homo_sapiens 0 302
ENST00000508666 TBCK-012 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000509532 TBCK-019 protein_coding Homo_sapiens 0 610
ENST00000509862 TBCK-008 protein_coding Homo_sapiens 0 396
ENST00000510927 TBCK-007 retained_intron Homo_sapiens 0 1834

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