C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029784 Celf3-201 ENSMUSG00000028137 10090 + 3:94478831-94492193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000029784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029784 0.048±0.00 8.523±3.98 0.277±0.00 87.000±49.74 0.019±0.01 3.819±1.90 0.067±0.01 0.192±0.08 0.022±0.01 0.346±0.10 0.423±0.14 0.103±0.05 19.277±12.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 IEA regulation of alternative mRNA splicing, via spliceosome
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0007283 IMP spermatogenesis
GO:0008380 IEA RNA splicing
GO:0030317 IMP sperm motility
GO:0048026 ISS positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290583 CELF3-001 protein_coding Homo_sapiens 0 3129
ENST00000290585 CELF3-002 protein_coding Homo_sapiens 0 1419
ENST00000419910 CELF3-006 retained_intron Homo_sapiens 0 758
ENST00000420342 CELF3-003 protein_coding Homo_sapiens 0 2782
ENST00000470688 CELF3-004 processed_transcript Homo_sapiens 0 1652
ENST00000478829 CELF3-007 processed_transcript Homo_sapiens 0 484
ENST00000479893 CELF3-005 processed_transcript Homo_sapiens 0 1134

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