C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily j, polypeptide 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030303 Cyp2j6-001 ENSMUSG00000052914 10090 - 4:96516138-96553661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030303 3.640±0.96 7.506±1.15 4.390±0.00 1.384±0.33 3.106±1.38 5.135±4.49 0.593±0.21 5.077±1.56 6.395±5.82 1.707±0.45 0.702±0.17 2.644±1.32 0.347±0.17 0.160±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F6 CIL_0004F6_000H CGP 4:96444596-96553661
CIL_0004F6 CIL_0004F6_000D CGP 4:96516138-96591578

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 IEA retinoid metabolic process
GO:0003958 IEA NADPH-hemoprotein reductase activity
GO:0005506 IEA iron ion binding
GO:0005783 IDA endoplasmic reticulum
GO:0007565 IEA female pregnancy
GO:0008392 IMP arachidonic acid epoxygenase activity
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IEA membrane
GO:0019369 IEA arachidonic acid metabolic process
GO:0020037 IEA heme binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371204 CYP2J2-001 protein_coding Homo_sapiens 0 1026
ENST00000466095 CYP2J2-003 processed_transcript Homo_sapiens 0 628
ENST00000468257 CYP2J2-004 processed_transcript Homo_sapiens 0 363
ENST00000469406 CYP2J2-005 processed_transcript Homo_sapiens 0 765
ENST00000492633 CYP2J2-002 processed_transcript Homo_sapiens 0 606

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