C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: connector enhancer of kinase suppressor of Ras 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030645 Cnksr1-001 ENSMUSG00000028841 10090 - 4:134228041-134238399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000030645
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000030645 1.329±0.95 4.454±0.85 0.085±0.02 2.609±1.20 11.298±2.43 0.963±0.31 4.374±0.71 0.068±0.05 5.055±0.57 28.834±1.73 1.456±0.62 2.163±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005938 IEA cell cortex
GO:0007265 IEA Ras protein signal transduction
GO:0007266 IEA Rho protein signal transduction
GO:0030674 IEA protein binding, bridging

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361530 CNKSR1-001 protein_coding Homo_sapiens 0 1554
ENST00000374253 CNKSR1-007 protein_coding Homo_sapiens 0 1467
ENST00000480348 CNKSR1-010 processed_transcript Homo_sapiens 4e-35 152
ENST00000481077 CNKSR1-008 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000482227 CNKSR1-002 nonsense_mediated_decay Homo_sapiens 0 1526
ENST00000524529 CNKSR1-012 retained_intron Homo_sapiens 0 263
ENST00000525687 CNKSR1-011 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000528001 CNKSR1-014 processed_transcript Homo_sapiens 0 289
ENST00000531150 CNKSR1-013 retained_intron Homo_sapiens 0 307
ENST00000531191 CNKSR1-003 protein_coding Homo_sapiens 0 1491

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