C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030660 Trappc3-001 ENSMUSG00000028847 10090 + 4:126262325-126275883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030660 31.241±4.05 11.839±1.02 39.748±6.31 52.374±4.33 15.514±0.58 16.797±1.33 19.028±1.94 35.323±4.62 18.158±3.03 23.374±4.49 9.911±1.26 18.249±13.66 46.005±10.61 9.265±2.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0006888 IDA ER to Golgi vesicle-mediated transport
GO:0030008 IDA TRAPP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373159 TRAPPC3-003 protein_coding Homo_sapiens 0 313
ENST00000373162 TRAPPC3-004 protein_coding Homo_sapiens 0 675
ENST00000373163 TRAPPC3-005 protein_coding Homo_sapiens 0 697
ENST00000373166 TRAPPC3-001 protein_coding Homo_sapiens 0 1118
ENST00000462715 TRAPPC3-002 processed_transcript Homo_sapiens 0 584
ENST00000469757 TRAPPC3-007 processed_transcript Homo_sapiens 6e-19 97
ENST00000616074 TRAPPC3-201 protein_coding Homo_sapiens 0 809
ENST00000616395 TRAPPC3-202 protein_coding Homo_sapiens 0 931
ENST00000617904 TRAPPC3-203 protein_coding Homo_sapiens 0 1035

Loading