C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hepatocyte growth factor activator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030985 Hgfac-201 ENSMUSG00000029102 10090 + 5:35041553-35048436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030985 0.932±0.86 0.097±0.06 2.157±0.26 0.209±0.16 0.325±0.26 210.327±14.70 0.120±0.03 11.770±2.60 152.658±76.60 1.977±1.07 0.036±0.00 3.158±1.46 1.953±2.45 0.203±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XB CIL_0001XB_0002 CGP 5:34949445-35048436
CIL_0001XC CIL_0001XC_0002 CGP 5:35041553-35087839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005615 IEA extracellular space
GO:0005737 IDA cytoplasm
GO:0005791 IDA rough endoplasmic reticulum
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382774 HGFAC-001 protein_coding Homo_sapiens 0 1550
ENST00000506132 HGFAC-002 retained_intron Homo_sapiens 0 544
ENST00000509689 HGFAC-003 retained_intron Homo_sapiens 0 852
ENST00000511533 HGFAC-004 protein_coding Homo_sapiens 0 1485

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