C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sel-1 suppressor of lin-12-like 3 (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031090 Sel1l3-201 ENSMUSG00000029189 10090 - 5:53107084-53213452 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031090 2.932±2.85 0.854±0.12 3.290±0.03 7.393±3.19 1.106±0.82 29.489±4.56 0.302±0.13 12.373±3.77 0.920±1.02 1.340±0.34 12.697±1.39 8.635±3.58 4.747±3.10 0.227±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000342 CIL_000342_0003 CGP 5:53038082-53213452
CIL_00079P CIL_00079P_0002 CGP 5:53107084-53283510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264868 SEL1L3-001 protein_coding Homo_sapiens 0 3591
ENST00000399878 SEL1L3-003 protein_coding Homo_sapiens 0 3903
ENST00000502949 SEL1L3-002 protein_coding Homo_sapiens 0 3587
ENST00000507618 SEL1L3-012 protein_coding Homo_sapiens 0 436
ENST00000509290 SEL1L3-011 retained_intron Homo_sapiens 0 255
ENST00000510448 SEL1L3-006 protein_coding Homo_sapiens 0 344
ENST00000510880 SEL1L3-010 protein_coding Homo_sapiens 0 459
ENST00000512286 SEL1L3-013 retained_intron Homo_sapiens 0 361
ENST00000513364 SEL1L3-009 processed_transcript Homo_sapiens 0 346
ENST00000513416 SEL1L3-005 retained_intron Homo_sapiens 0 459
ENST00000513691 SEL1L3-008 protein_coding Homo_sapiens 0 407
ENST00000514872 SEL1L3-007 protein_coding Homo_sapiens 0 346

Loading