C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031127 Slc10a4-001 ENSMUSG00000029219 10090 + 5:73006904-73014683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031127
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031127 0.090±0.03 3.000±0.92 0.063±0.00 3.117±2.25 0.430±0.14 0.099±0.03 0.337±0.16 0.032±0.02 0.045±0.01 0.029±0.01 0.582±0.23 0.080±0.06 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016021 IEA integral component of membrane
GO:0030534 IMP adult behavior
GO:0042493 IMP response to drug
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022887 slc10a4-001 protein_coding Danio_rerio 0 322
ENST00000273861 SLC10A4-001 protein_coding Homo_sapiens 0 1242

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