C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPARC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031249 Sparcl1-201 ENSMUSG00000029309 10090 - 5:104079111-104114088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031249 188.274±73.50 12.863±1.08 607.659±27.13 57.028±29.82 59.892±5.48 86.237±8.56 71.072±13.22 17.194±2.32 2.005±1.09 168.930±5.07 27.621±9.02 115.688±33.49 21.157±20.56 10.348±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BN CIL_0000BN_0002 CGP 5:104079111-104180127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007165 IEA signal transduction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282470 SPARCL1-001 protein_coding Homo_sapiens 0 891
ENST00000418378 SPARCL1-201 protein_coding Homo_sapiens 0 891
ENST00000503414 SPARCL1-005 protein_coding Homo_sapiens 0 891

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