C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SDA1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031364 Sdad1-201 ENSMUSG00000029415 10090 - 5:92284010-92310024 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031364
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031364 4.617±2.20 6.346±0.73 4.257±0.56 5.049±1.66 3.491±1.81 4.048±0.56 2.098±0.42 2.321±0.70 5.341±2.96 3.656±0.62 3.966±0.21 7.629±2.09 7.812±2.33 14.064±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071N CIL_00071N_0002 CGP 5:92257659-92310024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000055 IEA ribosomal large subunit export from nucleus
GO:0003674 ND molecular_function
GO:0005730 ISS nucleolus
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0030036 IEA actin cytoskeleton organization
GO:0042273 IEA ribosomal large subunit biogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356260 SDAD1-001 protein_coding Homo_sapiens 0 2457
ENST00000395710 SDAD1-002 nonsense_mediated_decay Homo_sapiens 0 2220
ENST00000395711 SDAD1-003 protein_coding Homo_sapiens 0 2060
ENST00000441308 SDAD1P2-001 processed_pseudogene Homo_sapiens 0 1351
ENST00000502543 SDAD1-011 processed_transcript Homo_sapiens 0 348
ENST00000503411 SDAD1-007 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000513089 SDAD1-012 processed_transcript Homo_sapiens 0 518
ENST00000519902 SDAD1P1-002 processed_transcript Homo_sapiens 0 1893
ENST00000524156 SDAD1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 2045
ENST00000625176 AC110615.1-201 protein_coding Homo_sapiens 0 429

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