C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 115, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031879 Fam115c-001 ENSMUSG00000029851 10090 - 6:42623019-42645254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031879
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031879 2.086±0.35 1.313±0.35 2.103±0.29 0.244±0.07 1.208±0.17 1.773±0.41 0.292±0.06 0.523±0.07 0.088±0.03 1.139±0.16 0.289±0.06 1.675±1.10 0.542±0.29 0.083±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OG CIL_0006OG_0003 CGP 6:42584866-42645254
CIL_0006OG CIL_0006OG_0004 CGP 6:42623019-42710072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291129 FAM115D-001 unprocessed_pseudogene Homo_sapiens 0 1472
ENST00000357344 FAM115C-002 protein_coding Homo_sapiens 0 1803
ENST00000411935 FAM115C-004 protein_coding Homo_sapiens 0 913
ENST00000425618 FAM115C-201 protein_coding Homo_sapiens 0 913
ENST00000441159 FAM115C-001 protein_coding Homo_sapiens 0 1982
ENST00000444908 FAM115C-003 protein_coding Homo_sapiens 0 1803
ENST00000463346 RP11-61L23.2-008 processed_transcript Homo_sapiens 0 246
ENST00000468266 RP11-61L23.2-005 processed_transcript Homo_sapiens 1e-29 134
ENST00000471316 RP11-61L23.2-007 processed_transcript Homo_sapiens 1e-29 134
ENST00000480264 RP11-61L23.2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 503
ENST00000481651 RP11-61L23.2-002 processed_transcript Homo_sapiens 0 246
ENST00000491047 RP11-61L23.2-006 processed_transcript Homo_sapiens 1e-29 134
ENST00000493239 RP11-61L23.2-009 processed_transcript Homo_sapiens 0 246
ENST00000494978 RP11-61L23.2-003 processed_transcript Homo_sapiens 0 510
ENST00000517565 RP11-61L23.2-004 processed_transcript Homo_sapiens 0 510
ENST00000518791 FAM115C-005 protein_coding Homo_sapiens 0 1299

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