C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and BTB (POZ) domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032169 Abtb1-201 ENSMUSG00000030083 10090 - 6:88835915-88841935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032169 17.273±2.05 22.773±5.76 18.204±3.05 14.045±5.21 19.935±2.81 23.577±4.07 12.896±1.75 18.212±2.77 24.547±6.73 20.464±1.94 13.118±1.22 20.131±6.19 12.682±4.96 15.079±4.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0002 VISTA 6:88734676-89336253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003746 IEA translation elongation factor activity
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006414 IEA translational elongation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232744 ABTB1-001 protein_coding Homo_sapiens 0 1554
ENST00000453791 ABTB1-004 protein_coding Homo_sapiens 0 1367
ENST00000464431 ABTB1-007 retained_intron Homo_sapiens 0 429
ENST00000466612 ABTB1-011 processed_transcript Homo_sapiens 3e-36 156
ENST00000467179 ABTB1-013 processed_transcript Homo_sapiens 0 730
ENST00000468137 ABTB1-006 protein_coding Homo_sapiens 0 1367
ENST00000474129 ABTB1-015 retained_intron Homo_sapiens 0 344
ENST00000475042 ABTB1-005 nonsense_mediated_decay Homo_sapiens 0 1367
ENST00000475265 ABTB1-009 retained_intron Homo_sapiens 0 449
ENST00000478298 ABTB1-014 retained_intron Homo_sapiens 0 213
ENST00000479280 ABTB1-012 retained_intron Homo_sapiens 0 610
ENST00000483857 ABTB1-008 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000491633 ABTB1-017 processed_transcript Homo_sapiens 0 449
ENST00000493365 ABTB1-010 retained_intron Homo_sapiens 0 374

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