C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032180 Wnt7a-001 ENSMUSG00000030093 10090 - 6:91363981-91411363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032180
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032180 6.398±6.39 0.004±0.00 5.815±2.19 0.039±0.00 0.016±0.00 0.009±0.00 0.025±0.01 0.010±0.01 4.824±0.92 0.020±0.00 4.315±2.03 0.096±0.07 0.237±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VF CIL_0002VF_0003 CGP 6:91212455-91411363

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000578 IEA embryonic axis specification
GO:0001502 IEA cartilage condensation
GO:0001525 IGI angiogenesis
GO:0002062 IEA chondrocyte differentiation
GO:0005102 TAS receptor binding
GO:0005109 IPI frizzled binding
GO:0005125 IEA cytokine activity
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0005788 TAS endoplasmic reticulum lumen
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0007269 IGI neurotransmitter secretion
GO:0008105 IDA asymmetric protein localization
GO:0008284 IEA positive regulation of cell proliferation
GO:0009887 TAS organ morphogenesis
GO:0009953 IMP dorsal/ventral pattern formation
GO:0009986 IDA cell surface
GO:0010595 IDA positive regulation of endothelial cell migration
GO:0010628 IDA positive regulation of gene expression
GO:0014719 IDA skeletal muscle satellite cell activation
GO:0014834 IDA skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration
GO:0021707 IDA cerebellar granule cell differentiation
GO:0021846 IEA cell proliferation in forebrain
GO:0022009 IGI central nervous system vasculogenesis
GO:0030010 IDA establishment of cell polarity
GO:0030326 IGI embryonic limb morphogenesis
GO:0031012 IDA extracellular matrix
GO:0031133 IDA regulation of axon diameter
GO:0032355 IEA response to estradiol
GO:0035019 IMP somatic stem cell maintenance
GO:0035115 IGI embryonic forelimb morphogenesis
GO:0035116 IGI embryonic hindlimb morphogenesis
GO:0035567 IGI non-canonical Wnt signaling pathway
GO:0035659 IEA Wnt signaling pathway involved in wound healing, spreading of epidermal cells
GO:0042060 IEA wound healing
GO:0042127 IMP regulation of cell proliferation
GO:0042733 IEA embryonic digit morphogenesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0043627 IMP response to estrogen
GO:0045165 IBA cell fate commitment
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046330 IBA positive regulation of JNK cascade
GO:0048103 IDA somatic stem cell division
GO:0048864 IEA stem cell development
GO:0050768 IEA negative regulation of neurogenesis
GO:0050770 IDA regulation of axonogenesis
GO:0050808 IGI synapse organization
GO:0051216 IDA cartilage development
GO:0051965 IDA positive regulation of synapse assembly
GO:0060021 IEA palate development
GO:0060054 IEA positive regulation of epithelial cell proliferation involved in wound healing
GO:0060065 IMP uterus development
GO:0060066 IMP oviduct development
GO:0060070 IGI canonical Wnt signaling pathway
GO:0060173 IDA limb development
GO:0061038 IMP uterus morphogenesis
GO:0071560 IEA cellular response to transforming growth factor beta stimulus
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104915 wnt7bb-201 protein_coding Danio_rerio 0 473
ENSDART00000156925 wnt7bb-001 protein_coding Danio_rerio 0 473
ENST00000285018 WNT7A-001 protein_coding Homo_sapiens 0 1666
ENST00000339464 WNT7B-001 protein_coding Homo_sapiens 0 621
ENST00000409496 WNT7B-003 protein_coding Homo_sapiens 0 621
ENST00000410089 WNT7B-002 protein_coding Homo_sapiens 0 621
ENST00000489346 WNT7A-003 processed_transcript Homo_sapiens 0 261
ENST00000497808 WNT7A-002 processed_transcript Homo_sapiens 0 351

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