C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BMS1 homolog, ribosome assembly protein (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032237 Bms1-201 ENSMUSG00000030138 10090 - 6:118383383-118419417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032237
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032237 2.759±0.30 0.869±0.29 5.115±0.89 9.580±5.57 1.878±0.79 1.450±0.37 2.529±0.34 2.502±0.69 5.136±4.11 3.623±0.50 6.945±0.42 7.281±11.66 18.913±13.96 34.786±43.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0042254 IEA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372011 BMS1P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 898
ENST00000374336 BMS1P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1271
ENST00000374518 BMS1-001 protein_coding Homo_sapiens 0 3751
ENST00000413193 AGAP10-201 protein_coding Homo_sapiens 0 364
ENST00000413293 LL22NC03-80A10.6-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1186
ENST00000417301 BMS1P13-001 unprocessed_pseudogene Homo_sapiens 0 942
ENST00000428213 BMS1P12-001 unprocessed_pseudogene Homo_sapiens 0 510
ENST00000433925 BMS1P19-001 processed_pseudogene Homo_sapiens 0 292
ENST00000441263 BMS1P4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1339
ENST00000442351 BMS1P11-001 unprocessed_pseudogene Homo_sapiens 0 959
ENST00000443754 BMS1P10-001 unprocessed_pseudogene Homo_sapiens 0 1164
ENST00000450360 BMS1P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1238
ENST00000453174 MBL1P-002 processed_transcript Homo_sapiens 0 407
ENST00000457640 BMS1P9-001 unprocessed_pseudogene Homo_sapiens 0 942
ENST00000532854 BMS1P2-003 processed_transcript Homo_sapiens 0 985
ENST00000554269 BMS1P15-001 unprocessed_pseudogene Homo_sapiens 0 1046
ENST00000556075 BMS1P16-001 unprocessed_pseudogene Homo_sapiens 0 1101
ENST00000565049 BMS1P8-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 562
ENST00000565156 BMS1P8-003 processed_transcript Homo_sapiens 0 497
ENST00000580094 BMS1P1-003 processed_transcript Homo_sapiens 0 970
ENST00000584747 BMS1P4-002 processed_transcript Homo_sapiens 0 1033
ENST00000602440 BMS1P7-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 981

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