C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi transport 1 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032372 Golt1b-001 ENSMUSG00000030245 10090 + 6:142387221-142403858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032372 7.315±1.75 3.731±0.93 8.834±1.47 8.839±4.78 3.184±1.26 4.710±0.57 3.793±0.58 3.018±0.32 3.977±3.21 5.273±1.10 4.234±0.36 5.118±1.73 13.130±6.54 2.549±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PT CIL_0005PT_0002 CGP 6:142350342-142403858
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0006XW CIL_0006XW_0003 CGP 6:142387221-142419730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0007165 IEA signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229314 GOLT1B-001 protein_coding Homo_sapiens 0 621
ENST00000535593 GOLT1B-002 processed_transcript Homo_sapiens 0 243
ENST00000539025 GOLT1B-005 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000539663 GOLT1B-008 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000540141 GOLT1B-004 protein_coding Homo_sapiens 0 470
ENST00000542038 GOLT1B-003 protein_coding Homo_sapiens 0 435
ENST00000542194 GOLT1B-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000545093 GOLT1B-009 processed_transcript Homo_sapiens 0 243
ENST00000545113 GOLT1B-006 retained_intron Homo_sapiens 0 191

Loading