C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma complex associated protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032627 Tubgcp5-201 ENSMUSG00000033790 10090 + 7:55794148-55831447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032627 1.851±0.28 4.291±0.59 3.746±0.50 5.099±0.72 1.221±0.75 0.935±0.38 1.143±0.14 1.190±0.40 1.645±0.92 1.589±0.15 1.947±0.29 2.520±1.81 3.196±0.97 1.395±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L9 CIL_0006L9_0002 CGP 7:55794148-55930700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005874 IEA microtubule
GO:0007020 IEA microtubule nucleation
GO:0008017 IEA microtubule binding
GO:0008274 IEA gamma-tubulin ring complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000610294 TUBGCP5-005 protein_coding Homo_sapiens 0 252
ENST00000612085 TUBGCP5-009 protein_coding Homo_sapiens 0 553
ENST00000614508 TUBGCP5-008 nonsense_mediated_decay Homo_sapiens 0 3456
ENST00000615383 TUBGCP5-001 protein_coding Homo_sapiens 0 3541
ENST00000615455 TUBGCP5-003 processed_transcript Homo_sapiens 0 863
ENST00000620361 AC135069.1-201 protein_coding Homo_sapiens 0 3541
ENST00000620435 TUBGCP5-002 protein_coding Homo_sapiens 0 3456
ENST00000622507 TUBGCP5-004 protein_coding Homo_sapiens 0 440

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