C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032667 Siglece-201 ENSMUSG00000030474 10090 - 7:43651070-43660161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032667 1.567±1.07 1.871±0.41 0.664±0.20 0.063±0.01 1.724±0.31 0.933±0.21 0.625±0.16 0.964±0.26 1.924±1.30 2.595±0.16 0.065±0.03 1.541±0.46 0.230±0.17 1.392±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038X CIL_00038X_0002 CGP 7:43634739-43660161

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IDA receptor activity
GO:0005057 IPI receptor signaling protein activity
GO:0007155 IDA cell adhesion
GO:0009897 IDA external side of plasma membrane
GO:0016021 ISS integral component of membrane
GO:0033691 IDA sialic acid binding
GO:0035556 IPI intracellular signal transduction
GO:0048029 IDA monosaccharide binding
GO:0050728 IMP negative regulation of inflammatory response
GO:0060101 IDA negative regulation of phagocytosis, engulfment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000611992 SIGLEC17P-002 processed_transcript Homo_sapiens 1e-28 132
ENST00000614626 SIGLEC17P-003 processed_transcript Homo_sapiens 1e-28 132
ENST00000618545 SIGLEC17P-001 processed_transcript Homo_sapiens 1e-28 132
ENST00000619985 SIGLEC17P-004 retained_intron Homo_sapiens 2e-28 132

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