C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HD domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032747 Hddc3-201 ENSMUSG00000030532 10090 + 7:80343137-80346097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032747 12.817±3.75 8.049±1.49 7.201±1.22 15.162±11.90 6.423±1.31 16.565±5.07 12.840±5.77 13.440±4.42 6.193±4.42 4.775±2.68 3.935±0.70 8.470±2.63 4.312±3.60 5.833±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008893 IEA guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330334 HDDC3-001 protein_coding Homo_sapiens 0 486
ENST00000394272 HDDC3-002 protein_coding Homo_sapiens 0 638
ENST00000494993 HDDC3-003 retained_intron Homo_sapiens 0 529
ENST00000559834 HDDC3-006 retained_intron Homo_sapiens 0 460
ENST00000559898 HDDC3-004 protein_coding Homo_sapiens 0 486
ENST00000561036 HDDC3-005 protein_coding Homo_sapiens 0 460

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