C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: de-etiolated homolog 1 (Arabidopsis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032839 Det1-001 ENSMUSG00000030610 10090 - 7:78827474-78847236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032839 5.694±1.97 6.801±1.28 4.819±0.58 4.094±2.65 6.602±1.74 6.949±1.04 3.880±0.85 3.787±0.53 3.873±1.75 3.617±0.52 3.291±0.66 7.513±3.99 1.963±0.82 3.776±1.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011H CIL_00011H_0002 CGP 7:78783119-78847236
CIL_00011E CIL_00011E_0002 CGP 7:78822962-78911209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268148 DET1-001 protein_coding Homo_sapiens 0 2183
ENST00000444300 DET1-201 protein_coding Homo_sapiens 0 2119
ENST00000557837 DET1-003 nonsense_mediated_decay Homo_sapiens 0 1027
ENST00000557842 DET1-002 nonsense_mediated_decay Homo_sapiens 0 1808
ENST00000558413 DET1-004 protein_coding Homo_sapiens 0 233
ENST00000564406 DET1-007 protein_coding Homo_sapiens 0 2119

Loading