C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 90B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032842 Ccdc90b-001 ENSMUSG00000030613 10090 + 7:92561149-92582294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000032842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000032842 4.047±1.14 5.122±1.09 7.172±2.68 15.410±4.01 2.809±0.95 2.910±1.19 5.403±0.43 3.953±0.90 3.731±2.87 2.542±0.98 6.348±0.79 9.833±10.85 17.337±15.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260054 CCDC90B-002 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000455220 CCDC90B-003 protein_coding Homo_sapiens 0 819
ENST00000514414 RP11-629B11.4-001 processed_pseudogene Homo_sapiens 0 750
ENST00000525503 CCDC90B-006 protein_coding Homo_sapiens 0 817
ENST00000525504 CCDC90B-019 processed_transcript Homo_sapiens 0 237
ENST00000525916 CCDC90B-015 processed_transcript Homo_sapiens 0 326
ENST00000526265 CCDC90B-005 nonsense_mediated_decay Homo_sapiens 2e-40 171
ENST00000526631 CCDC90B-014 retained_intron Homo_sapiens 0 433
ENST00000527025 CCDC90B-011 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000527495 CCDC90B-018 protein_coding Homo_sapiens 0 455
ENST00000528149 CCDC90B-010 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000529073 CCDC90B-017 protein_coding Homo_sapiens 0 481
ENST00000529312 CCDC90B-013 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000529611 CCDC90B-004 protein_coding Homo_sapiens 0 817
ENST00000529689 CCDC90B-001 protein_coding Homo_sapiens 0 856
ENST00000529745 CCDC90B-009 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000529856 CCDC90B-008 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000530253 CCDC90B-016 retained_intron Homo_sapiens 5e-40 169
ENST00000533761 CCDC90B-007 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000534753 CCDC90B-012 nonsense_mediated_decay Homo_sapiens 0 636

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