C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032898 Ipo5-201 ENSMUSG00000030662 10090 + 14:120911194-120948042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032898 22.011±8.26 9.216±4.92 25.964±1.37 20.757±5.04 15.756±2.69 10.428±2.56 22.724±2.12 12.040±0.28 16.154±12.18 10.464±1.11 24.188±7.51 27.258±8.32 24.524±14.78 57.169±19.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000O3 CIL_0000O3_0002 CGP 14:120478461-120948042
CIL_0004FZ CIL_0004FZ_0003 CGP 14:120911194-121283744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006607 IDA NLS-bearing protein import into nucleus
GO:0006610 IEA ribosomal protein import into nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity
GO:0016020 IEA membrane
GO:0031965 IEA nuclear membrane
GO:0042307 IMP positive regulation of protein import into nucleus
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding
GO:0071230 IDA cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261574 IPO5-001 protein_coding Homo_sapiens 0 4420
ENST00000357602 IPO5-002 protein_coding Homo_sapiens 0 4420
ENST00000403772 IPO5-003 protein_coding Homo_sapiens 0 606
ENST00000421861 IPO5-020 protein_coding Homo_sapiens 0 420
ENST00000460070 IPO5-008 protein_coding Homo_sapiens 0 540
ENST00000463157 IPO5-015 protein_coding Homo_sapiens 0 344
ENST00000468620 IPO5-028 retained_intron Homo_sapiens 0 385
ENST00000469360 IPO5-004 protein_coding Homo_sapiens 0 4213
ENST00000470493 IPO5-025 retained_intron Homo_sapiens 0 337
ENST00000471898 IPO5-017 protein_coding Homo_sapiens 0 368
ENST00000473582 IPO5-023 protein_coding Homo_sapiens 0 636
ENST00000475420 IPO5-021 protein_coding Homo_sapiens 0 741
ENST00000479736 IPO5-026 retained_intron Homo_sapiens 0 586
ENST00000480611 IPO5-012 protein_coding Homo_sapiens 0 451
ENST00000480641 IPO5-022 protein_coding Homo_sapiens 0 435
ENST00000481455 IPO5-014 protein_coding Homo_sapiens 0 464
ENST00000481689 IPO5-011 protein_coding Homo_sapiens 0 392
ENST00000485433 IPO5-010 protein_coding Homo_sapiens 0 291
ENST00000489058 IPO5-009 protein_coding Homo_sapiens 5.00264e-43 178
ENST00000490369 IPO5-018 nonsense_mediated_decay Homo_sapiens 3.00004e-41 172
ENST00000490680 IPO5-006 protein_coding Homo_sapiens 0 4322
ENST00000491555 IPO5-005 retained_intron Homo_sapiens 0 2950
ENST00000493122 IPO5-029 retained_intron Homo_sapiens 0 449
ENST00000493281 IPO5-016 protein_coding Homo_sapiens 0 250
ENST00000493492 IPO5-027 processed_transcript Homo_sapiens 0 294
ENST00000496368 IPO5-019 protein_coding Homo_sapiens 0 392
ENST00000497270 IPO5-024 nonsense_mediated_decay Homo_sapiens 0 566

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