C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033035 Slc5a11-001 ENSMUSG00000030769 10090 + 7:123214813-123273253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyOvaryPlacentaENSMUST00000033035
Transcript ID Bladder Breast Kidney Ovary Placenta
ENSMUST00000033035 0.015±0.00 0.081±0.00 5.869±0.95 0.373±0.00 0.671±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KT CIL_0005KT_0002 CGP 7:123123885-123273253
CIL_0005KU CIL_0005KU_0002 CGP 7:123214780-123369915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006814 IEA sodium ion transport
GO:0006915 IEA apoptotic process
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347898 SLC5A11-001 protein_coding Homo_sapiens 0 2139
ENST00000424767 SLC5A11-201 protein_coding Homo_sapiens 0 1530
ENST00000449109 SLC5A11-202 protein_coding Homo_sapiens 0 695
ENST00000488922 SLC5A11-002 nonsense_mediated_decay Homo_sapiens 0 1977
ENST00000545376 SLC5A11-203 protein_coding Homo_sapiens 0 1530
ENST00000565769 SLC5A11-005 protein_coding Homo_sapiens 0 1978
ENST00000567758 SLC5A11-004 protein_coding Homo_sapiens 0 1530
ENST00000568579 SLC5A11-003 protein_coding Homo_sapiens 0 1530
ENST00000569071 SLC5A11-006 protein_coding Homo_sapiens 0 695
ENST00000569520 SLC5A11-009 protein_coding Homo_sapiens 0 379

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