C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein, X-linked 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033433 Rbmx2-001 ENSMUSG00000031107 10090 + X:48695004-48710723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033433 1.003±0.52 0.356±0.21 3.212±0.37 4.965±0.62 0.918±0.22 0.648±0.12 0.615±0.27 0.765±0.16 4.003±4.33 1.111±0.37 0.796±0.11 1.924±2.03 4.649±2.13 1.154±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GH CIL_0000GH_0003 CGP X:48667979-48710723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049103 rbmx2-201 protein_coding Danio_rerio 0 248
ENSDART00000143373 rbmx2-001 protein_coding Danio_rerio 0 248
ENST00000257020 RBMX2P2-001 processed_pseudogene Homo_sapiens 0 575
ENST00000305536 RBMX2-001 protein_coding Homo_sapiens 0 641
ENST00000424312 RBMX2P5-001 processed_pseudogene Homo_sapiens 0 547
ENST00000450122 RBMX2P3-001 processed_pseudogene Homo_sapiens 0 586
ENST00000469953 RBMX2-002 processed_transcript Homo_sapiens 0 514
ENST00000619267 RBMX2-201 protein_coding Homo_sapiens 0 614

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