C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi-repeat-containing protein, X-linked 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033606 Srpx2-001 ENSMUSG00000031253 10090 + X:133908426-133931814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033606 5.836±3.21 1.803±0.30 2.326±0.17 0.299±0.10 4.907±3.70 2.536±1.21 2.071±0.61 1.933±0.14 0.555±0.24 1.988±0.79 0.616±0.16 6.674±2.40 0.852±0.39 0.246±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B6 CIL_0007B6_0002 CGP X:133891068-133932446
CIL_0007BB CIL_0007BB_0002 CGP X:133908426-133981812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005102 IPI receptor binding
GO:0005615 ISS extracellular space
GO:0005737 ISS cytoplasm
GO:0009986 ISS cell surface
GO:0015630 ISS microtubule cytoskeleton
GO:0016337 ISS single organismal cell-cell adhesion
GO:0030054 IEA cell junction
GO:0036458 ISS hepatocyte growth factor binding
GO:0042325 ISS regulation of phosphorylation
GO:0042802 ISS identical protein binding
GO:0048870 ISS cell motility
GO:0051965 ISS positive regulation of synapse assembly
GO:0060076 ISS excitatory synapse
GO:0071625 IMP vocalization behavior
GO:0090050 IMP positive regulation of cell migration involved in sprouting angiogenesis
GO:0097060 ISS synaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373004 SRPX2-001 protein_coding Homo_sapiens 0 1821
ENST00000481988 SRPX2-002 processed_transcript Homo_sapiens 7e-33 145

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