C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small integral membrane protein 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033935 Smim19-201 ENSMUSG00000031534 10090 - 8:22462615-22476879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033935 12.484±1.65 7.484±1.66 12.753±0.47 6.602±2.38 10.711±2.33 4.632±0.59 13.849±2.32 6.099±0.00 7.858±1.14 18.153±1.17 7.149±2.14 6.203±0.86 4.368±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000414154 SMIM19-002 protein_coding Homo_sapiens 0 351
ENST00000416469 SMIM19-003 protein_coding Homo_sapiens 0 335
ENST00000417410 SMIM19-001 protein_coding Homo_sapiens 0 353
ENST00000438528 SMIM19-004 protein_coding Homo_sapiens 0 351
ENST00000490331 SMIM19-007 protein_coding Homo_sapiens 0 351
ENST00000498447 SMIM19-005 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000529505 SMIM19-008 processed_transcript Homo_sapiens 7.00649e-44 182

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