C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033938 Polb-201 ENSMUSG00000031536 10090 - 8:22628119-22653437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033938
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033938 8.388±1.67 6.367±4.68 25.392±5.12 39.800±6.54 9.455±3.08 11.126±3.97 11.141±2.48 10.579±2.92 9.461±2.64 9.110±1.53 25.204±2.29 9.434±6.24 16.983±7.15 102.934±27.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 TAS synaptonemal complex
GO:0003684 IEA damaged DNA binding
GO:0003887 ISS DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005874 ISO microtubule
GO:0005876 ISO spindle microtubule
GO:0006260 IEA DNA replication
GO:0006284 ISS base-excision repair
GO:0006287 TAS base-excision repair, gap-filling
GO:0006290 IEA pyrimidine dimer repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0008017 ISO microtubule binding
GO:0008630 IMP intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016829 ISS lyase activity
GO:0019899 IEA enzyme binding
GO:0045471 IEA response to ethanol
GO:0046872 IEA metal ion binding
GO:0051402 IGI neuron apoptotic process
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265421 POLB-001 protein_coding Homo_sapiens 0 1349
ENST00000517393 POLB-011 protein_coding Homo_sapiens 1e-37 159
ENST00000518579 POLB-016 protein_coding Homo_sapiens 0 580
ENST00000518925 POLB-005 protein_coding Homo_sapiens 0 531
ENST00000519094 POLB-003 retained_intron Homo_sapiens 1e-39 167
ENST00000519524 POLB-010 retained_intron Homo_sapiens 0 318
ENST00000519771 POLB-014 nonsense_mediated_decay Homo_sapiens 0 765
ENST00000520008 POLB-002 protein_coding Homo_sapiens 0 678
ENST00000521290 POLB-008 protein_coding Homo_sapiens 0 562
ENST00000521418 POLB-013 retained_intron Homo_sapiens 0 333
ENST00000521492 POLB-012 protein_coding Homo_sapiens 0 407
ENST00000522297 POLB-004 retained_intron Homo_sapiens 0 368
ENST00000522610 POLB-015 nonsense_mediated_decay Homo_sapiens 0 774
ENST00000523465 POLB-009 retained_intron Homo_sapiens 2e-28 130
ENST00000524208 POLB-007 nonsense_mediated_decay Homo_sapiens 0 745
ENST00000532157 POLB-006 protein_coding Homo_sapiens 0 372

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