C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034111 Slc10a7-201 ENSMUSG00000031684 10090 + 8:78509335-78734005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034111 5.737±0.74 2.390±1.15 4.660±0.07 2.713±1.80 5.226±1.16 4.842±1.35 1.612±0.27 2.688±0.38 2.933±0.94 6.610±0.34 0.744±0.28 5.642±1.39 5.501±1.76 3.099±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K4 CIL_0007K4_0002 UCNEbase 8:78112601-78725703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0008150 ND biological_process
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335472 SLC10A7-001 protein_coding Homo_sapiens 0 1663
ENST00000394059 SLC10A7-004 protein_coding Homo_sapiens 0 717
ENST00000432059 SLC10A7-002 protein_coding Homo_sapiens 0 900
ENST00000502607 SLC10A7-003 protein_coding Homo_sapiens 0 418
ENST00000507030 SLC10A7-009 protein_coding Homo_sapiens 0 1125
ENST00000507560 SLC10A7-008 processed_transcript Homo_sapiens 0 374
ENST00000511315 SLC10A7-006 processed_transcript Homo_sapiens 0 654
ENST00000511374 SLC10A7-005 protein_coding Homo_sapiens 0 320
ENST00000513583 SLC10A7-007 processed_transcript Homo_sapiens 8e-16 88

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