C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CKLF-like MARVEL transmembrane domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034343 Cmtm3-201 ENSMUSG00000031875 10090 + 8:104340594-104347672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034343 50.274±14.00 44.638±19.83 25.186±1.88 9.158±6.03 31.720±1.59 7.114±1.66 8.616±1.24 10.372±3.55 7.174±4.40 28.366±5.49 1.650±0.63 58.361±23.93 17.008±9.24 2.932±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IT CIL_0004IT_0002 CGP 8:104322237-104347672
CIL_0003BR CIL_0003BR_0003 CGP 8:104340594-104395807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IDA cytoplasm
GO:0006935 IEA chemotaxis
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane
GO:0050861 IDA positive regulation of B cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361909 CMTM3-004 protein_coding Homo_sapiens 0 593
ENST00000424011 CMTM3-001 protein_coding Homo_sapiens 0 593
ENST00000460097 CMTM3-002 protein_coding Homo_sapiens 0 490
ENST00000562357 CMTM3-012 protein_coding Homo_sapiens 0 399
ENST00000562707 CMTM3-008 protein_coding Homo_sapiens 0 593
ENST00000563672 CMTM3-007 protein_coding Homo_sapiens 0 385
ENST00000564060 CMTM3-011 protein_coding Homo_sapiens 0 322
ENST00000565003 CMTM3-010 protein_coding Homo_sapiens 0 544
ENST00000565666 CMTM3-014 protein_coding Homo_sapiens 0 333
ENST00000566121 CMTM3-009 protein_coding Homo_sapiens 0 492
ENST00000566756 CMTM3-005 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000567572 CMTM3-006 protein_coding Homo_sapiens 0 604
ENST00000568477 CMTM3-018 protein_coding Homo_sapiens 0 492

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