C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034618 Pdzd3-201 ENSMUSG00000032105 10090 - 9:44247312-44251464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034618
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034618 0.054±0.01 0.080±0.01 0.054±0.01 0.215±0.14 0.144±0.03 3.987±1.31 0.672±0.11 26.720±3.61 0.026±0.02 0.067±0.00 0.353±0.06 0.164±0.12 4.274±2.67 0.058±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068P CIL_00068P_0002 CGP 9:44247312-44268599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005903 IDA brush border
GO:0008022 IEA protein C-terminus binding
GO:0030251 ISS guanylate cyclase inhibitor activity
GO:0031283 IEA negative regulation of guanylate cyclase activity
GO:0035003 IEA subapical complex
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322712 PDZD3-005 protein_coding Homo_sapiens 0 701
ENST00000355547 PDZD3-001 protein_coding Homo_sapiens 0 1297
ENST00000525131 PDZD3-008 protein_coding Homo_sapiens 0 1160
ENST00000527028 PDZD3-006 retained_intron Homo_sapiens 0 505
ENST00000529098 PDZD3-007 retained_intron Homo_sapiens 0 324
ENST00000531114 PDZD3-004 protein_coding Homo_sapiens 0 1158
ENST00000534790 PDZD3-002 retained_intron Homo_sapiens 0 217

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