C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LysM, putative peptidoglycan-binding, domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034702 Lysmd2-201 ENSMUSG00000032184 10090 + 9:75625732-75637773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034702 19.594±11.01 27.138±9.43 21.628±3.19 28.926±19.80 22.613±9.35 11.176±1.38 7.743±1.19 1.709±0.29 1.329±0.89 44.834±8.98 4.016±1.10 33.953±13.56 9.954±5.17 1.624±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YJ CIL_0004YJ_0002 CGP 9:75565621-75637773
CIL_0004YG CIL_0004YG_0002 CGP 9:75625732-75683996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267838 LYSMD2-001 protein_coding Homo_sapiens 0 939
ENST00000454181 LYSMD2-002 protein_coding Homo_sapiens 0 532
ENST00000560491 LYSMD2-004 protein_coding Homo_sapiens 0 368

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