C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700017B05 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034846 1700017B05Rik-201 ENSMUSG00000032300 10090 - 9:57252322-57262599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034846 4.775±2.36 11.595±1.16 1.083±0.06 0.596±0.27 4.741±2.04 3.961±0.42 1.405±0.33 2.517±0.15 1.803±0.75 3.987±0.42 0.487±0.26 11.694±3.36 9.122±7.58 18.432±2.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A3 CIL_0002A3_0002 CGP 9:57252322-57440114

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360639 C15orf39-001 protein_coding Homo_sapiens 0 1834
ENST00000394987 C15orf39-002 protein_coding Homo_sapiens 0 1888
ENST00000565074 C15orf39-008 protein_coding Homo_sapiens 0 1284
ENST00000567617 C15orf39-004 protein_coding Homo_sapiens 0 1559

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