C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 1, subfamily a, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034865 Cyp1a1-201 ENSMUSG00000032315 10090 + 9:57697613-57703822 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034865 0.954±0.35 0.121±0.06 8.105±1.72 0.044±0.00 0.512±0.09 0.058±0.03 0.206±0.16 0.450±0.05 0.398±0.24 19.128±3.23 1.025±0.21 0.111±0.07 0.679±0.54 0.050±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0001889 IEA liver development
GO:0003824 IEA catalytic activity
GO:0004497 IDA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006778 IEA porphyrin-containing compound metabolic process
GO:0007568 IEA aging
GO:0008283 IEA cell proliferation
GO:0008395 IEA steroid hydroxylase activity
GO:0009308 IMP amine metabolic process
GO:0009404 IMP toxin metabolic process
GO:0009611 IEA response to wounding
GO:0009615 IEA response to virus
GO:0009624 IEA response to nematode
GO:0009635 IEA response to herbicide
GO:0009636 IMP response to toxic substance
GO:0009792 IEA embryo development ending in birth or egg hatching
GO:0009804 IEA coumarin metabolic process
GO:0009812 IEA flavonoid metabolic process
GO:0010033 IEA response to organic substance
GO:0010041 IEA response to iron(III) ion
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IEA membrane
GO:0016491 IEA oxidoreductase activity
GO:0016679 IEA oxidoreductase activity, acting on diphenols and related substances as donors
GO:0016711 IEA flavonoid 3'-monooxygenase activity
GO:0016712 IDA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
GO:0017143 IEA insecticide metabolic process
GO:0017144 IEA drug metabolic process
GO:0018894 IEA dibenzo-p-dioxin metabolic process
GO:0019341 IEA dibenzo-p-dioxin catabolic process
GO:0019899 IEA enzyme binding
GO:0020037 IEA heme binding
GO:0032094 IEA response to food
GO:0032451 IEA demethylase activity
GO:0032496 IEA response to lipopolysaccharide
GO:0032502 IEA developmental process
GO:0033189 IEA response to vitamin A
GO:0035902 IEA response to immobilization stress
GO:0042493 IEA response to drug
GO:0042904 IEA 9-cis-retinoic acid biosynthetic process
GO:0043010 IEA camera-type eye development
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046483 IMP heterocycle metabolic process
GO:0046677 IEA response to antibiotic
GO:0046685 IEA response to arsenic-containing substance
GO:0048565 IEA digestive tract development
GO:0050665 IMP hydrogen peroxide biosynthetic process
GO:0055093 IEA response to hyperoxia
GO:0055114 IEA oxidation-reduction process
GO:0060137 IEA maternal process involved in parturition
GO:0070330 IEA aromatase activity
GO:0070365 IEA hepatocyte differentiation
GO:0070576 IEA vitamin D 24-hydroxylase activity
GO:0070988 IEA demethylation
GO:0071407 ISO cellular response to organic cyclic compound
GO:1900087 IEA positive regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343932 CYP1A2-001 protein_coding Homo_sapiens 0 832
ENST00000379727 CYP1A1-001 protein_coding Homo_sapiens 0 1376
ENST00000395048 CYP1A1-201 protein_coding Homo_sapiens 0 1376
ENST00000395049 CYP1A1-003 protein_coding Homo_sapiens 0 1123
ENST00000562201 CYP1A1-007 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000564596 CYP1A1-004 protein_coding Homo_sapiens 0 758
ENST00000566503 CYP1A1-006 protein_coding Homo_sapiens 0 782
ENST00000567032 CYP1A1-002 protein_coding Homo_sapiens 0 1376
ENST00000569630 CYP1A1-005 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000612821 CYP1A1-202 protein_coding Homo_sapiens 0 774
ENST00000617691 CYP1A1-203 protein_coding Homo_sapiens 0 1123

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