C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, beta 3 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034983 Atp1b3-001 ENSMUSG00000032412 10090 - 9:96332655-96364442 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034983
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034983 53.732±6.09 61.602±6.41 58.316±5.72 21.411±9.21 43.705±14.02 22.064±2.24 16.529±3.58 38.725±2.08 13.542±5.96 65.417±4.38 9.197±1.04 43.617±8.22 45.813±12.04 153.397±55.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001671 IEA ATPase activator activity
GO:0005391 IEA sodium:potassium-exchanging ATPase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005901 IEA caveola
GO:0006883 IEA cellular sodium ion homeostasis
GO:0010107 IEA potassium ion import
GO:0030001 IEA metal ion transport
GO:0030007 IEA cellular potassium ion homeostasis
GO:0032781 IEA positive regulation of ATPase activity
GO:0035725 IEA sodium ion transmembrane transport
GO:0036376 IEA sodium ion export from cell
GO:0050821 IEA protein stabilization
GO:0051117 IEA ATPase binding
GO:0070062 IEA extracellular vesicular exosome
GO:0072659 IEA protein localization to plasma membrane
GO:0086009 IEA membrane repolarization
GO:1901018 IEA positive regulation of potassium ion transmembrane transporter activity
GO:1903278 IEA positive regulation of sodium ion export from cell
GO:1903288 IEA positive regulation of potassium ion import
GO:1903291 IEA positive regulation of ATP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286371 ATP1B3-001 protein_coding Homo_sapiens 0 1153
ENST00000462082 ATP1B3-007 protein_coding Homo_sapiens 0 492
ENST00000465172 ATP1B3-002 nonsense_mediated_decay Homo_sapiens 0 813
ENST00000466678 ATP1B3-003 nonsense_mediated_decay Homo_sapiens 0 883
ENST00000475483 ATP1B3-004 protein_coding Homo_sapiens 0 357
ENST00000484727 ATP1B3-011 processed_transcript Homo_sapiens 0 424
ENST00000495216 ATP1B3-008 protein_coding Homo_sapiens 0 270

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