C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035034 Mrps22-001 ENSMUSG00000032459 10090 - 9:98588730-98601660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035034 6.908±2.98 75.390±1.61 10.127±1.76 13.225±3.81 12.772±5.36 15.155±0.41 8.002±0.82 13.696±0.98 19.420±6.30 5.379±1.25 8.459±0.61 26.609±8.64 23.570±8.78 12.045±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R4 CIL_0002R4_0002 CGP 9:98588730-98843385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 ISO structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 ISO mitochondrial small ribosomal subunit
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310776 MRPS22-201 protein_coding Homo_sapiens 0 1077
ENST00000465056 MRPS22-005 protein_coding Homo_sapiens 0 1081
ENST00000465373 MRPS22-008 protein_coding Homo_sapiens 0 494
ENST00000466690 MRPS22-010 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000478464 MRPS22-007 protein_coding Homo_sapiens 0 1042
ENST00000480644 MRPS22-012 protein_coding Homo_sapiens 0 243
ENST00000480938 MRPS22-003 retained_intron Homo_sapiens 0 592
ENST00000483545 MRPS22-011 retained_intron Homo_sapiens 0 610
ENST00000486705 MRPS22-009 retained_intron Homo_sapiens 0 420
ENST00000495075 MRPS22-001 protein_coding Homo_sapiens 0 1077
ENST00000498505 MRPS22-004 nonsense_mediated_decay Homo_sapiens 0 662

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