C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teratocarcinoma-derived growth factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035075 Tdgf1-201 ENSMUSG00000032494 10090 - 9:110939610-110946158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000035075
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035075 0.044±0.00 0.004±0.00 0.048±0.03 0.071±0.04 0.111±0.02 0.034±0.00 0.009±0.00 0.271±0.00 0.024±0.00 1.063±0.57 0.088±0.02 0.068±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000187 ISO activation of MAPK activity
GO:0001570 IMP vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0002042 IEA cell migration involved in sprouting angiogenesis
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0007369 IGI gastrulation
GO:0007507 IEA heart development
GO:0008083 ISO growth factor activity
GO:0008284 ISO positive regulation of cell proliferation
GO:0008595 IMP anterior/posterior axis specification, embryo
GO:0009948 IGI anterior/posterior axis specification
GO:0009966 IDA regulation of signal transduction
GO:0009986 IDA cell surface
GO:0010595 IEA positive regulation of endothelial cell migration
GO:0016324 IEA apical plasma membrane
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0019897 IDA extrinsic component of plasma membrane
GO:0030334 IMP regulation of cell migration
GO:0030335 IEA positive regulation of cell migration
GO:0030509 IDA BMP signaling pathway
GO:0030512 IGI negative regulation of transforming growth factor beta receptor signaling pathway
GO:0035729 IEA cellular response to hepatocyte growth factor stimulus
GO:0043066 IEA negative regulation of apoptotic process
GO:0044344 IEA cellular response to fibroblast growth factor stimulus
GO:0045121 IEA membrane raft
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048146 IMP positive regulation of fibroblast proliferation
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0055007 IMP cardiac muscle cell differentiation
GO:0060070 IDA canonical Wnt signaling pathway
GO:0071346 IEA cellular response to interferon-gamma
GO:0071354 IEA cellular response to interleukin-6
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071364 IEA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296144 LRRC2-002 protein_coding Homo_sapiens 2e-27 128
ENST00000296145 TDGF1-001 protein_coding Homo_sapiens 0 337
ENST00000493351 TDGF1P3-001 transcribed_processed_pseudogene Homo_sapiens 0 331
ENST00000542931 TDGF1-201 protein_coding Homo_sapiens 0 337
ENST00000593394 TDGF1P7-001 processed_pseudogene Homo_sapiens 0 302
ENST00000602699 TDGF1P3-002 processed_transcript Homo_sapiens 0 331

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