C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactotransferrin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035077 Ltf-201 ENSMUSG00000032496 10090 + 9:111019292-111042766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035077
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035077 5.742±6.95 0.042±0.02 0.005±0.00 0.073±0.03 13.736±5.00 0.042±0.02 2.596±2.52 0.133±0.06 10.064±25.06 5.633±1.46 0.105±0.00 46.836±30.60 0.544±0.61 6.059±0.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001817 ISS regulation of cytokine production
GO:0001895 IEA retina homeostasis
GO:0002227 ISS innate immune response in mucosa
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0006826 IEA iron ion transport
GO:0006879 IEA cellular iron ion homeostasis
GO:0008199 IEA ferric iron binding
GO:0008201 IEA heparin binding
GO:0008233 IDA peptidase activity
GO:0008236 IEA serine-type peptidase activity
GO:0019731 ISS antibacterial humoral response
GO:0019732 ISS antifungal humoral response
GO:0030141 IEA secretory granule
GO:0031665 ISS negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0032680 ISS regulation of tumor necrosis factor production
GO:0033690 ISS positive regulation of osteoblast proliferation
GO:0034145 IEA positive regulation of toll-like receptor 4 signaling pathway
GO:0042581 ISS specific granule
GO:0043066 ISS negative regulation of apoptotic process
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043539 IEA protein serine/threonine kinase activator activity
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0060349 ISS bone morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0071902 IEA positive regulation of protein serine/threonine kinase activity
GO:1900159 ISS positive regulation of bone mineralization involved in bone maturation
GO:1900229 ISS negative regulation of single-species biofilm formation in or on host organism
GO:1902732 ISS positive regulation of chondrocyte proliferation
GO:2000308 ISS negative regulation of tumor necrosis factor (ligand) superfamily member 11 production
GO:2001205 ISS negative regulation of osteoclast development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231751 LTF-001 protein_coding Homo_sapiens 0 1264
ENST00000417439 LTF-003 protein_coding Homo_sapiens 0 1264
ENST00000426532 LTF-011 protein_coding Homo_sapiens 0 1264
ENST00000443496 LTF-002 protein_coding Homo_sapiens 0 1264
ENST00000493056 LTF-008 processed_transcript Homo_sapiens 0 276

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