C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, muscarinic 1, CNS
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035444 Chrm1-001 ENSMUSG00000032773 10090 + 19:8664005-8681567 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035444 0.035±0.03 0.540±0.24 0.037±0.00 3.942±4.93 0.912±0.20 5.350±1.23 0.057±0.03 0.184±0.04 0.122±0.12 0.560±0.27 0.014±0.00 0.150±0.09 0.009±0.00 0.160±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 IEA integral component of plasma membrane
GO:0030054 IEA cell junction
GO:0040012 IMP regulation of locomotion
GO:0043270 ISO positive regulation of ion transport
GO:0045211 IEA postsynaptic membrane
GO:0046541 IEA saliva secretion
GO:0050890 IEA cognition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000012932 chrm5a-201 protein_coding Danio_rerio 0 213
ENST00000306960 CHRM1-001 protein_coding Homo_sapiens 0 2706
ENST00000536524 CHRM1-003 protein_coding Homo_sapiens 0 579
ENST00000543973 CHRM1-002 protein_coding Homo_sapiens 0 1873

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