C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid dehydrogenase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036049 Hsdl1-201 ENSMUSG00000034189 10090 - 8:119561979-119575200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036049 10.010±0.72 12.733±0.55 7.965±0.03 25.122±11.06 9.327±4.60 9.656±1.03 4.926±0.49 8.723±1.58 4.744±1.70 12.696±1.28 4.525±0.93 12.750±3.53 6.546±2.63 5.901±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AP CIL_0002AP_0002 CGP 8:119508156-119575200
CIL_0004ZQ CIL_0004ZQ_0002 CGP 8:119561979-119598454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219439 HSDL1-001 protein_coding Homo_sapiens 0 821
ENST00000434463 HSDL1-002 protein_coding Homo_sapiens 0 342
ENST00000562224 HSDL1-005 protein_coding Homo_sapiens 0 344
ENST00000564998 HSDL1-004 protein_coding Homo_sapiens 0 279
ENST00000567294 HSDL1-003 retained_intron Homo_sapiens 0 279
ENST00000568857 HSDL1-006 protein_coding Homo_sapiens 0 344

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