C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036126 Parp2-201 ENSMUSG00000036023 10090 + 14:50807946-50821300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036126 2.788±1.07 1.403±0.59 13.415±1.43 9.142±4.41 2.355±1.20 1.988±0.66 2.514±0.52 2.678±0.60 8.857±8.17 2.908±0.87 3.049±0.59 6.198±5.77 11.074±5.85 2.625±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OD CIL_0001OD_0002 CGP 14:50789249-50821300
CIL_0001OA CIL_0001OA_0002 CGP 14:50807946-50870560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003950 IDA NAD+ ADP-ribosyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0006281 TAS DNA repair
GO:0006284 IMP base-excision repair
GO:0006471 IEA protein ADP-ribosylation
GO:0097191 IDA extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250416 PARP2-002 protein_coding Homo_sapiens 0 1768
ENST00000429687 PARP2-001 protein_coding Homo_sapiens 0 1781
ENST00000527915 PARP2-003 protein_coding Homo_sapiens 0 1535
ENST00000529465 PARP2-012 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000530598 PARP2-010 retained_intron Homo_sapiens 0 575
ENST00000539930 PARP2-013 protein_coding Homo_sapiens 0 597

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