C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036174 Gramd1c-001 ENSMUSG00000036292 10090 - 16:43980355-44016436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000036174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000036174 0.642±0.57 0.087±0.03 1.100±0.12 0.189±0.01 0.442±0.14 0.462±0.32 0.092±0.00 0.687±0.15 1.076±0.23 0.759±0.26 0.107±0.00 0.505±0.07 1.123±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CC CIL_0003CC_0002 CGP 16:43969078-44027945
CIL_000555 CIL_000555_0002 CGP 16:43980350-44139705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358160 GRAMD1C-001 protein_coding Homo_sapiens 0 1328
ENST00000440446 GRAMD1C-006 protein_coding Homo_sapiens 0 1450
ENST00000462838 GRAMD1C-007 protein_coding Homo_sapiens 0 1013
ENST00000463760 GRAMD1C-015 processed_transcript Homo_sapiens 8e-28 126
ENST00000466898 GRAMD1C-008 retained_intron Homo_sapiens 0 289
ENST00000472026 GRAMD1C-005 protein_coding Homo_sapiens 0 1325
ENST00000472384 GRAMD1C-003 nonsense_mediated_decay Homo_sapiens 7e-30 135
ENST00000479212 GRAMD1C-004 processed_transcript Homo_sapiens 0 909
ENST00000484714 GRAMD1C-016 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000488680 GRAMD1C-011 protein_coding Homo_sapiens 1e-29 134
ENST00000491038 GRAMD1C-013 retained_intron Homo_sapiens 0 388

Loading