C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036381 Chmp7-201 ENSMUSG00000034190 10090 - 14:69716979-69732570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036381 16.340±3.18 15.788±5.23 14.733±1.22 32.926±4.88 10.791±3.90 12.112±4.12 12.307±1.78 14.254±1.69 10.917±2.66 11.836±3.45 15.872±0.40 26.016±6.54 16.594±5.14 6.512±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YD CIL_0007YD_0002 VISTA 14:69222690-69823937
CIL_0008FQ CIL_0008FQ_0002 VISTA 14:69236074-69837250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000815 ISS ESCRT III complex
GO:0008565 ISS protein transporter activity
GO:0015031 IEA protein transport
GO:0045324 ISS late endosome to vacuole transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313219 CHMP7-201 protein_coding Homo_sapiens 0 2187
ENST00000397677 CHMP7-001 protein_coding Homo_sapiens 0 2187
ENST00000517325 CHMP7-002 nonsense_mediated_decay Homo_sapiens 0 1639
ENST00000519414 CHMP7-006 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000519503 CHMP7-003 nonsense_mediated_decay Homo_sapiens 0 743
ENST00000519529 CHMP7-007 retained_intron Homo_sapiens 0 505
ENST00000519984 CHMP7-005 protein_coding Homo_sapiens 0 507
ENST00000520102 CHMP7-008 processed_transcript Homo_sapiens 0 606
ENST00000521656 CHMP7-009 retained_intron Homo_sapiens 0 268
ENST00000523091 CHMP7-004 retained_intron Homo_sapiens 0 747

Loading