C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerate kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036382 Glyctk-002 ENSMUSG00000020258 10090 - 9:106152857-106158118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036382
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036382 0.381±0.20 0.824±0.54 0.247±0.00 1.928±1.13 0.463±0.21 0.798±0.29 0.284±0.05 28.773±4.97 26.871±16.26 0.183±0.02 0.262±0.00 0.655±0.38 6.543±4.02 1.755±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0006468 ISS protein phosphorylation
GO:0008887 ISS glycerate kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305690 GLYCTK-201 protein_coding Homo_sapiens 0 527
ENST00000436784 GLYCTK-005 protein_coding Homo_sapiens 0 1461
ENST00000473032 GLYCTK-002 protein_coding Homo_sapiens 0 529
ENST00000473583 GLYCTK-010 retained_intron Homo_sapiens 0 536
ENST00000477382 GLYCTK-004 protein_coding Homo_sapiens 0 525
ENST00000486393 GLYCTK-001 nonsense_mediated_decay Homo_sapiens 0 1452

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