C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like A domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036615 Ptplad1-201 ENSMUSG00000033629 10090 - 9:64986985-65021717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036615 17.419±8.51 236.169±15.74 26.443±1.38 40.600±6.43 16.641±6.67 20.657±9.76 5.109±1.18 22.809±1.56 45.401±14.68 33.622±10.74 3.637±0.34 65.756±40.86 12.440±5.39 11.627±5.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005925 IEA focal adhesion
GO:0006633 IEA fatty acid biosynthetic process
GO:0007249 IDA I-kappaB kinase/NF-kappaB signaling
GO:0007254 IDA JNK cascade
GO:0007266 IDA Rho protein signal transduction
GO:0016021 IEA integral component of membrane
GO:0016829 IEA lyase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261875 PTPLAD1-001 protein_coding Homo_sapiens 0 1467
ENST00000442729 PTPLAD1-011 protein_coding Homo_sapiens 0 865
ENST00000561763 PTPLAD1-012 processed_transcript Homo_sapiens 8e-21 104
ENST00000562832 PTPLAD1-009 protein_coding Homo_sapiens 0 824
ENST00000562901 PTPLAD1-003 protein_coding Homo_sapiens 0 1232
ENST00000565299 PTPLAD1-004 protein_coding Homo_sapiens 0 1177
ENST00000566074 PTPLAD1-006 protein_coding Homo_sapiens 0 1230
ENST00000566239 PTPLAD1-010 retained_intron Homo_sapiens 0 233
ENST00000566511 PTPLAD1-007 protein_coding Homo_sapiens 0 1230
ENST00000568793 PTPLAD1-005 protein_coding Homo_sapiens 0 1232
ENST00000569894 PTPLAD1-008 protein_coding Homo_sapiens 0 1230
ENST00000624437 PTPLAD1-013 TEC Homo_sapiens 3e-27 128

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